Compilatore ifort: differenze tra le versioni

Da MeteOceanWiki.
(→‎netcdf per c)
Riga 146: Riga 146:
  
  
−
Poi bisogna settare le variabili per le librerie ''netcdf''
+
Poi bisogna settare le variabili per le librerie ''netcdf'' (VECCHIO MODO, NON FUNZIONA, VEDERE SEZIONE DOPO)
  
 
  ''export NETCDFROOT=/opt/netcdf_4.4.3_ifort''
 
  ''export NETCDFROOT=/opt/netcdf_4.4.3_ifort''
Riga 159: Riga 159:
  
 
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64''
 
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64''
 +
 +
 +
Per far funzioanre ''netcdf'' bisogna fare questi settaggi
 +
 +
''export CC=/opt/intel/bin/icc''
 +
''export CXX=/opt/intel/bin/icpc''
 +
export FC=/opt/intel/bin/ifort
 +
export F77=/opt/intel/bin/ifort
 +
export MPICXX=/opt/mpich3.2/bin/mpicxx
 +
export MPIF77=/opt/mpich3.2/bin/mpif90
 +
export MPIFC=/opt/mpich3.2/bin/mpif90
 +
export FCLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl -lmpifort'
 +
export FLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl'
 +
export LIBS='-L/opt/mpich3.2/lib64 -L/opt/intel/lib/intel64 -lrt -lexpat -lstdc++ -limf -lsvml -lirng -lintlc -lmpich -lmpifort'
 +
export FLIBS='L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64 -lnetcdf -lnetcdf'
 +
export NETCDF_CFLAGS='-I/opt/netcdf_4.4.4_ifort/include -I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/hdf5-1.10.1/include -I/opt/netcdf_4.5.0_icc/include'
 +
export NETCDF_LIBS='-L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64 -lnetcdf -lnetcdf'
 +
export NETCDF_FORTRAN_LIBS=' -L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64'
 +
export NETCDF_LIBS='-L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64'
 +
./configure --prefix=/opt/delft3D-t-7959-ifort/
  
  

Versione delle 14:20, 21 dic 2017

Indice

mpich2

Per prima cosa scaricare mpich da http://www.mpich.org/downloads/


Bisogna poi settare le variabili di compilazione per configure coerentemente con la propria installazione della macchina 

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort CXXFLAGS=' -O2 -fPIC' CFLAGS=' -O2 -fPIC ' FCFLAGS=' -O2 -fPIC ' FFLAGS=' -O2 -fPIC ' ./configure --prefix=/opt/mpich3.2/


Quindi dare in sequenza i comandi: 

make

make check

make install


Infine aggiungere al .bashrc la path e le lib di mpich 

export PATH=$PATH:/opt/mpich3.2/bin

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/mpich3.2/lib

zlib

Scaricare zlib da http://www.zlib.net/


Esportare le variabili di sistema di ifort e mpich 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel/lib/intel64

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/mpich3.2/lib64


Impostare i settaggi coerenti con le path di installazione locali 

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort MPICXX=/opt/mpich3.2/bin/mpicxx MPIFC=/opt/mpich3.2/bin/mpif90 MPICC=/opt/mpich3.2/bin/mpicc CPPFLAGS='-I/opt/intel/include -I/opt/mpich3.2/include' LDFLAGS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64' ./configure --prefix=/opt/zlib-1.2.8/


Quindi compilare e installare 

make

make check

make install

szip

Scaricare szip da https://www.hdfgroup.org/doc_resource/SZIP/


Impostare i settaggi coerenti con le path di installazione locali 

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort MPICXX=/opt/mpich3.2/bin/mpicxx MPIFC=/opt/mpich3.2/bin/mpif90 MPICC=/opt/mpich3.2/bin/mpicc CPPFLAGS='-I/opt/intel/include -I/opt/mpich3.2/include' LDFLAGS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64' ./configure --prefix=/opt/szip-2.1


Quindi compilare 

make

make check

make install

hdf5

Scaricare hdf5 da https://www.hdfgroup.org/HDF5/release/obtainsrc.html


Impostare i settaggi coerenti con le path di installazione locali

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort MPICXX=/opt/mpich3.2/bin/mpicxx MPIFC=/opt/mpich3.2/bin/mpif90 MPICC=/opt/mpich3.2/bin/mpicc ./configure --with-zlib=/opt/zlib-1.2.8/include,/opt/zlib-1.2.8/lib --with-szlib=/opt/szip-2.1 --prefix=/opt/hdf5-1.8.16/ --enable-fortran --enable-cxx


Quindi compilare e installare 

make

make check

make install

netcdf per c

Scaricare netcdf per c da https://www.unidata.ucar.edu/downloads/netcdf/index.jsp


Esportare le librerie di hdf5 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.8.16/lib64


Settare la configurazione per il ./configure

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort MPICXX=/opt/mpich3.2/bin/mpicxx MPIFC=/opt/mpich3.2/bin/mpif90 MPICC=/opt/mpich3.2/bin/mpicc CPPFLAGS='-I/opt/zlib-1.2.8/include -I/opt/szip-2.1/include -I/opt/hdf5-1.8.16/include' LDFLAGS='-L/opt/zlib-1.2.8/lib -L/opt/szip-2.1/lib64 -L/opt/hdf5-1.8.16/lib64' ./configure --prefix=/opt/netcdf_4.4.0_icc


Compilare e installare1 

make

make check

make install

netcdf per fortran

Scaricare netcdf per fortran da http://github.com/Unidata/netcdf-c/releases


Esportare le librerie di hdf5 e netcdf-c 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.8.16/lib64:/opt/netcdf_4.4.0_icc/lib64


Lanciare il ./configure coerente con le installazioni locali

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort MPICXX=/opt/mpich3.2/bin/mpicxx MPIFC=/opt/mpich3.2/bin/mpif90 MPICC=/opt/mpich3.2/bin/mpicc CPPFLAGS='-I/opt/zlib-1.2.8/include -I/opt/szip-2.1/include -I/opt/hdf5-1.8.16/include -I/opt/netcdf_4.4.0_icc/include' LDFLAGS='-L/opt/zlib-1.2.8/lib -L/opt/szip-2.1/lib64 -L/opt/hdf5-1.8.16/lib64 -L/opt/netcdf_4.4.0_icc/lib64' ./configure --prefix=/opt/netcdf_4.4.3_ifort


Quindi compilare e installare 

make

make check

make install

Compilazione di Delft3D

Innanzitutto verificare che le $LD_LIBRARY_PATH siano quelle giuste: 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/zlib-1.2.8/lib

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/szip-2.1/lib64

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.8.16/lib64

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.4.0_icc/lib64

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.4.3_ifort/lib64


Poi bisogna settare le variabili per le librerie netcdf (VECCHIO MODO, NON FUNZIONA, VEDERE SEZIONE DOPO) 

export NETCDFROOT=/opt/netcdf_4.4.3_ifort

export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64

export NETCDFROOT=/opt/netcdf_4.4.0_icc

export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64


Per far funzioanre netcdf bisogna fare questi settaggi 

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc

export FC=/opt/intel/bin/ifort export F77=/opt/intel/bin/ifort export MPICXX=/opt/mpich3.2/bin/mpicxx export MPIF77=/opt/mpich3.2/bin/mpif90 export MPIFC=/opt/mpich3.2/bin/mpif90 export FCLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl -lmpifort' export FLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl' export LIBS='-L/opt/mpich3.2/lib64 -L/opt/intel/lib/intel64 -lrt -lexpat -lstdc++ -limf -lsvml -lirng -lintlc -lmpich -lmpifort' export FLIBS='L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64 -lnetcdf -lnetcdf' export NETCDF_CFLAGS='-I/opt/netcdf_4.4.4_ifort/include -I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/hdf5-1.10.1/include -I/opt/netcdf_4.5.0_icc/include' export NETCDF_LIBS='-L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64 -lnetcdf -lnetcdf' export NETCDF_FORTRAN_LIBS=' -L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64' export NETCDF_LIBS='-L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64' 

./configure --prefix=/opt/delft3D-t-7959-ifort/


Quindi impostare i settaggi di configurazione con ./configure

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort MPICXX=/opt/mpich3.2/bin/mpicxx MPIF77=/opt/mpich3.2/bin/mpif90 MPIFC=/opt/mpich3.2/bin/mpif90 FCLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl -lmpifort' FLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl' LIBS=' -L/opt/mpich3.2/lib64 -L/opt/intel/lib/intel64 -lrt -lexpat -lstdc++ -limf -lsvml -lirng -lintlc -lmpich -lmpifort' PPFLAGS='-I/opt/zlib-1.2.8/include -I/opt/szip-2.1/include -I/opt/hdf5-1.8.15/include -I/opt/netcdf_4.4.0_icc/include -I/opt/netcdf_4.4.3_ifort/include' LDFLAGS='-L/opt/zlib-1.2.8/lib -L/opt/szip-2.1/lib64 -L/opt/hdf5-1.8.16/lib64 -L/opt/netcdf_4.4.0_icc/lib64 -L/opt/netcdf_4.4.3_ifort/lib64' ./configure --prefix=/opt/Delft3D/5740_ifort


Infine compilare e installare 

make

make install
Estratto da "http://www3.dicca.unige.it/meteocean/mediawiki/index.php?title=Compilatore_ifort&oldid=371"