Compilatore ifort: differenze tra le versioni

Da MeteOceanWiki.
(→‎netcdf per fortran)
(→‎Compilazione di Delft3D)
Riga 180: Riga 180:
 
Innanzitutto verificare che le ''$LD_LIBRARY_PATH'' siano quelle giuste:
 
Innanzitutto verificare che le ''$LD_LIBRARY_PATH'' siano quelle giuste:
  
−
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/zlib-1.2.8/lib''
+
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/zlib-1.2.11/lib''
−
 
+
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/szip-2.1.1/lib64''
−
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/szip-2.1/lib64''
+
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.10.1/lib64''
−
 
+
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.5.0_icc/lib64''
−
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.8.16/lib64''
+
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.4.4_ifort/lib64''
−
 
+
−
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.4.0_icc/lib64''
+
−
 
+
−
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.4.3_ifort/lib64''
+
  
  
Riga 194: Riga 190:
  
 
  ''export NETCDFROOT=/opt/netcdf_4.4.3_ifort''
 
  ''export NETCDFROOT=/opt/netcdf_4.4.3_ifort''
−
 
 
  ''export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH''
 
  ''export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH''
−
 
 
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64''
 
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64''
−
 
 
  ''export NETCDFROOT=/opt/netcdf_4.4.0_icc''
 
  ''export NETCDFROOT=/opt/netcdf_4.4.0_icc''
−
 
 
  ''export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH''
 
  ''export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH''
−
 
 
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64''
 
  ''export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64''
  
Riga 238: Riga 229:
  
 
  ''make''
 
  ''make''
−
 
 
  ''make install''
 
  ''make install''

Versione delle 15:09, 21 dic 2017

Indice

mpich2

Per prima cosa scaricare mpich da http://www.mpich.org/downloads/


Bisogna poi settare le variabili di compilazione per configure coerentemente con la propria installazione della macchina 

CC=/opt/intel/bin/icc
CXX=/opt/intel/bin/icpc 
FC=/opt/intel/bin/ifort
F77=/opt/intel/bin/ifort 
CXXFLAGS=' -O2 -fPIC' 
CFLAGS=' -O2 -fPIC ' 
FCFLAGS=' -O2 -fPIC ' 
FFLAGS=' -O2 -fPIC ' 
./configure --prefix=/opt/mpich3.2/


Quindi dare in sequenza i comandi: 

make
make check
make install


Infine aggiungere al .bashrc la path e le lib di mpich 

export PATH=$PATH:/opt/mpich3.2/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/mpich3.2/lib

zlib

Scaricare zlib da http://www.zlib.net/ 

wget https://www.zlib.net/zlib-1.2.11.tar.gz

Esportare le variabili di sistema di ifort e mpich 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel/lib/intel64
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/mpich3.2/lib64


Impostare i settaggi coerenti con le path di installazione locali 

CC=/opt/intel/bin/icc
CXX=/opt/intel/bin/icpc
FC=/opt/intel/bin/ifort 
F77=/opt/intel/bin/ifort 
MPICXX=/opt/mpich3.2/bin/mpicxx
MPIFC=/opt/mpich3.2/bin/mpif90 
MPICC=/opt/mpich3.2/bin/mpicc 
CPPFLAGS='-I/opt/intel/include -I/opt/mpich3.2/include'  
LDFLAGS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64' 
./configure --prefix=/opt/zlib-1.2.11/


Quindi compilare e installare 

make
make check
make install

szip

Scaricare szip da https://www.hdfgroup.org/doc_resource/SZIP/ 

wget https://support.hdfgroup.org/ftp/lib-external/szip/2.1.1/src/szip-2.1.1.tar.gz

Impostare i settaggi coerenti con le path di installazione locali 

CC=/opt/intel/bin/icc
CXX=/opt/intel/bin/icpc
FC=/opt/intel/bin/ifort 
F77=/opt/intel/bin/ifort 
MPICXX=/opt/mpich3.2/bin/mpicxx 
MPIFC=/opt/mpich3.2/bin/mpif90 
MPICC=/opt/mpich3.2/bin/mpicc
CPPFLAGS='-I/opt/intel/include -I/opt/mpich3.2/include' 
LDFLAGS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64' 
./configure --prefix=/opt/szip-2.1.1


Quindi compilare 

make
make check
make install

hdf5

Scaricare hdf5 da https://www.hdfgroup.org/HDF5/release/obtainsrc.html 

wget https://support.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.10.1.tar


Impostare i settaggi coerenti con le path di installazione locali 

CC=/opt/intel/bin/icc
CXX=/opt/intel/bin/icpc 
FC=/opt/intel/bin/ifort 
F77=/opt/intel/bin/ifort 
MPICXX=/opt/mpich3.2/bin/mpicxx 
MPIFC=/opt/mpich3.2/bin/mpif90
MPICC=/opt/mpich3.2/bin/mpicc
./configure --with-zlib=/opt/zlib-1.2.11/include,/opt/zlib-1.2.11/lib --with-szlib=/opt/szip-2.1.1 --prefix=/opt/hdf5-1.10.1/ --enable-fortran --enable-cxx


Quindi compilare e installare 

make
make check
make install

netcdf per c

Scaricare netcdf per c da https://www.unidata.ucar.edu/downloads/netcdf/index.jsp 

wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4.5.0.tar.gz


Esportare le librerie di hdf5 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.10.1/lib64


Settare la configurazione per il ./configure 

CC=/opt/intel/bin/icc
CXX=/opt/intel/bin/icpc
FC=/opt/intel/bin/ifort
F77=/opt/intel/bin/ifort
MPICXX=/opt/mpich3.2/bin/mpicxx
MPIFC=/opt/mpich3.2/bin/mpif90
MPICC=/opt/mpich3.2/bin/mpicc
CPPFLAGS='-I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/hdf5-1.10.1/include' 
LDFLAGS='-L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64' 
./configure --prefix=/opt/netcdf_4.5.0_icc


Compilare e installare1 

make
make check
make install

netcdf per fortran

Scaricare netcdf per fortran da http://github.com/Unidata/netcdf-c/releases 

wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-fortran-4.4.4.tar.gz


Esportare le librerie di hdf5 e netcdf-c 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.10.1/lib64:/opt/netcdf_4.5.0_icc/lib64


Lanciare il ./configure coerente con le installazioni locali 

CC=/opt/intel/bin/icc
CXX=/opt/intel/bin/icpc 
FC=/opt/intel/bin/ifort 
F77=/opt/intel/bin/ifort 
MPICXX=/opt/mpich3.2/bin/mpicxx 
MPIFC=/opt/mpich3.2/bin/mpif90 
MPICC=/opt/mpich3.2/bin/mpicc 
CPPFLAGS='-I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/hdf5-1.10.1/include -I/opt/netcdf_4.5.0_icc/include' 
LDFLAGS='-L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64' 
./configure --prefix=/opt/netcdf_4.4.4_ifort


Quindi compilare e installare 

make
make check
make install

Compilazione di Delft3D

Innanzitutto verificare che le $LD_LIBRARY_PATH siano quelle giuste: 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/zlib-1.2.11/lib
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/szip-2.1.1/lib64
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.10.1/lib64
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.5.0_icc/lib64
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.4.4_ifort/lib64


Poi bisogna settare le variabili per le librerie netcdf (VECCHIO MODO, NON FUNZIONA, VEDERE SEZIONE DOPO) 

export NETCDFROOT=/opt/netcdf_4.4.3_ifort
export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64
export NETCDFROOT=/opt/netcdf_4.4.0_icc
export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64

Quindi impostare i settaggi di configurazione con ./configure

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort MPICXX=/opt/mpich3.2/bin/mpicxx MPIF77=/opt/mpich3.2/bin/mpif90 MPIFC=/opt/mpich3.2/bin/mpif90 FCLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl -lmpifort' FLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl' LIBS=' -L/opt/mpich3.2/lib64 -L/opt/intel/lib/intel64 -lrt -lexpat -lstdc++ -limf -lsvml -lirng -lintlc -lmpich -lmpifort' PPFLAGS='-I/opt/zlib-1.2.8/include -I/opt/szip-2.1/include -I/opt/hdf5-1.8.15/include -I/opt/netcdf_4.4.0_icc/include -I/opt/netcdf_4.4.3_ifort/include' LDFLAGS='-L/opt/zlib-1.2.8/lib -L/opt/szip-2.1/lib64 -L/opt/hdf5-1.8.16/lib64 -L/opt/netcdf_4.4.0_icc/lib64 -L/opt/netcdf_4.4.3_ifort/lib64' ./configure --prefix=/opt/Delft3D/5740_ifort



Per far funzioanre netcdf bisogna fare questi settaggi 

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc
export FC=/opt/intel/bin/ifort
export F77=/opt/intel/bin/ifort
export MPICXX=/opt/mpich3.2/bin/mpicxx
export MPIF77=/opt/mpich3.2/bin/mpif90
export MPIFC=/opt/mpich3.2/bin/mpif90
export FCLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl -lmpifort' 
export FLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl' 
export LIBS='-L/opt/mpich3.2/lib64 -L/opt/intel/lib/intel64 -lrt -lexpat -lstdc++ -limf -lsvml -lirng -lintlc -lmpich -lmpifort' 
export FLIBS='L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64 -lnetcdf -lnetcdf' 
export NETCDF_CFLAGS='-I/opt/netcdf_4.4.4_ifort/include -I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/hdf5-1.10.1/include -I/opt/netcdf_4.5.0_icc/include' 
export NETCDF_LIBS='-L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64 -lnetcdf -lnetcdf' 
export NETCDF_FORTRAN_LIBS=' -L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64' 
export NETCDF_LIBS='-L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64' 

./configure --prefix=/opt/delft3D-t-7959-ifort/



Infine compilare e installare 

make
make install
Estratto da "http://www3.dicca.unige.it/meteocean/mediawiki/index.php?title=Compilatore_ifort&oldid=384"