Compilazione parallelo e librerie: differenze tra le versioni

Versione delle 15:42, 7 ott 2020

export mpif=mpich3.2.1
export hdff=hdf5-1.10.7
export ncc=netcdf_4.7.4_icc
export ncf=netcdf_4.5.3_ifort

Compiling MPICH

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc 
export FC=/opt/intel/bin/ifort
export F77=/opt/intel/bin/ifort 
export CXXFLAGS=' -O2 -fPIC' 
export CFLAGS=' -O2 -fPIC ' 
export FCFLAGS=' -O2 -fPIC ' 
export FFLAGS=' -O2 -fPIC ' 
./configure --prefix=/opt/$mpif/

Compiling zlib and szip libraries

export PATH=$PATH:/opt/$mpif/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/$mpif/lib

export MPICXX=/opt/$mpif/bin/mpicxx
export MPIFC=/opt/$mpif/bin/mpif90 
export MPICC=/opt/$mpif/bin/mpicc 
export CPPFLAGS='-I/opt/intel/include -I/opt/'$mpif'/include'  
export LDFLAGS='-L/opt/intel/lib/intel64 -L/opt/'$mpif'/lib64' 

./configure --prefix=/opt/zlib-1.2.11/ 

./configure --prefix=/opt/szip-2.1.1

Compiling hdf5

./configure --with-zlib=/opt/zlib-1.2.11/include,/opt/zlib-1.2.11/lib --with-szlib=/opt/szip-2.1.1 --prefix=/opt/$hdff/ --enable-fortran --enable-cxx

Compiling netcdf for c

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/$hdff/lib64
export CPPFLAGS='-I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/'$hdff'/include' 
export LDFLAGS='-L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/'$hdff'/lib64'  

./configure --prefix=/opt/$ncc

Compiling netcdf for fortran

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/$ncc/lib64
export CPPFLAGS='-I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/'$hdff'/include -I/opt/'$ncc'/include' 
export LDFLAGS='-L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/'$hdff'/lib64 -L/opt/'$ncc'/lib64'

./configure --prefix=/opt/$ncf