Compilatore ifort: differenze tra le versioni

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(→‎szip)
Riga 62: Riga 62:
 
  ''export LDFLAGS='-L/opt/intel/lib/intel64 -L'$dstD$mpif'/lib64' ''
 
  ''export LDFLAGS='-L/opt/intel/lib/intel64 -L'$dstD$mpif'/lib64' ''
 
  ''./configure --prefix=$dstD/szip-2.1.1''
 
  ''./configure --prefix=$dstD/szip-2.1.1''
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Quindi compilare
 
  
 
  ''make''
 
  ''make''
Riga 72: Riga 69:
 
== hdf5 ==
 
== hdf5 ==
  
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Scaricare ''hdf5'' da https://www.hdfgroup.org/HDF5/release/obtainsrc.html
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Scaricare ''hdf5'' da https://www.hdfgroup.org/downloads/hdf5
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wget https://support.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.10.1.tar
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Impostare i settaggi coerenti con le path di installazione locali
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  ''export CC=/opt/intel/bin/icc''
 
  ''export CC=/opt/intel/bin/icc''
Riga 87: Riga 79:
 
  ''export MPICC=/opt/mpich3.2/bin/mpicc''
 
  ''export MPICC=/opt/mpich3.2/bin/mpicc''
 
  ''./configure --with-zlib=/opt/zlib-1.2.11/include,/opt/zlib-1.2.11/lib --with-szlib=/opt/szip-2.1.1 --prefix=/opt/hdf5-1.10.1/ --enable-fortran --enable-cxx''  
 
  ''./configure --with-zlib=/opt/zlib-1.2.11/include,/opt/zlib-1.2.11/lib --with-szlib=/opt/szip-2.1.1 --prefix=/opt/hdf5-1.10.1/ --enable-fortran --enable-cxx''  
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Quindi compilare e installare
 
  
 
  ''make''
 
  ''make''

Versione delle 13:57, 11 feb 2021

#################################################################                                                                                                                   
# Exporting packages roots                                                                                                                                                           
export dstD=/home/gbesio/opt/
export dstD=/opt/                                                                                                                                                        
export mpif=mpich-3.2.1                                                                                                                                                              
export hdff=hdf5-1.10.7                                                                                                                                                              
export ncc=netcdf_4.7.4_icc                                                                                                                                                          
export ncf=netcdf_4.5.3_ifort

Indice

mpich2 

wget https://www.mpich.org/static/downloads/3.2.1/mpich-3.2.1.tar.gz

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc 
export FC=/opt/intel/bin/ifort
export F77=/opt/intel/bin/ifort 
export CXXFLAGS=' -O2 -fPIC' 
export CFLAGS=' -O2 -fPIC ' 
export FCFLAGS=' -O2 -fPIC ' 
export FFLAGS=' -O2 -fPIC ' 
./configure --prefix=$dstD$mpif

make
make check
make install

export PATH=$PATH:$dstD$mpif/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$dstD$mpif/lib64

zlib 

wget https://www.zlib.net/zlib-1.2.11.tar.gz

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc
export FC=/opt/intel/bin/ifort 
export F77=/opt/intel/bin/ifort 
export MPICXX=$dstD$mpif/bin/mpicxx
export MPIFC=$dstD$mpif/bin/mpif90 
export MPICC=$dstD$mpif/bin/mpicc 
export CPPFLAGS='-I/opt/intel/include -I'$dstD$mpif'/include'  
export LDFLAGS='-L/opt/intel/lib/intel64 -L'$dstD$mpif'/lib64' 
./configure --prefix=$dstD/zlib-1.2.11/

make
make check
make install

szip 

wget https://support.hdfgroup.org/ftp/lib-external/szip/2.1.1/src/szip-2.1.1.tar.gz

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc
export FC=/opt/intel/bin/ifort 
export F77=/opt/intel/bin/ifort 
export MPICXX=$dstD$mpif/bin/mpicxx 
export MPIFC=$dstD$mpif/bin/mpif90 
export MPICC=$dstD$mpif/bin/mpicc
export CPPFLAGS='-I/opt/intel/include -I'$dstD$mpif'/include' 
export LDFLAGS='-L/opt/intel/lib/intel64 -L'$dstD$mpif'/lib64' 
./configure --prefix=$dstD/szip-2.1.1

make
make check
make install

hdf5

Scaricare hdf5 da https://www.hdfgroup.org/downloads/hdf5 

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc 
export FC=/opt/intel/bin/ifort 
export F77=/opt/intel/bin/ifort 
export MPICXX=/opt/mpich3.2/bin/mpicxx 
export MPIFC=/opt/mpich3.2/bin/mpif90
export MPICC=/opt/mpich3.2/bin/mpicc
./configure --with-zlib=/opt/zlib-1.2.11/include,/opt/zlib-1.2.11/lib --with-szlib=/opt/szip-2.1.1 --prefix=/opt/hdf5-1.10.1/ --enable-fortran --enable-cxx 

make
make check
make install

netcdf per c

Scaricare netcdf per c da https://www.unidata.ucar.edu/downloads/netcdf/index.jsp 

wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4.5.0.tar.gz


Esportare le librerie di hdf5 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.10.1/lib64


Settare la configurazione per il ./configure 

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc
export FC=/opt/intel/bin/ifort
export F77=/opt/intel/bin/ifort
export MPICXX=/opt/mpich3.2/bin/mpicxx
export MPIFC=/opt/mpich3.2/bin/mpif90
export MPICC=/opt/mpich3.2/bin/mpicc
export CPPFLAGS='-I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/hdf5-1.10.1/include' 
export LDFLAGS='-L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64' 
./configure --prefix=/opt/netcdf_4.5.0_icc


Compilare e installare 

make
make check
make install

netcdf per fortran

Scaricare netcdf per fortran da http://github.com/Unidata/netcdf-c/releases 

wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-fortran-4.4.4.tar.gz


Esportare le librerie di hdf5 e netcdf-c 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.10.1/lib64:/opt/netcdf_4.5.0_icc/lib64


Lanciare il ./configure coerente con le installazioni locali 

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc 
export FC=/opt/intel/bin/ifort 
export F77=/opt/intel/bin/ifort 
export MPICXX=/opt/mpich3.2/bin/mpicxx 
export MPIFC=/opt/mpich3.2/bin/mpif90 
export MPICC=/opt/mpich3.2/bin/mpicc 
export CPPFLAGS='-I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/hdf5-1.10.1/include -I/opt/netcdf_4.5.0_icc/include' 
export LDFLAGS='-L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64' 
./configure --prefix=/opt/netcdf_4.4.4_ifort


Quindi compilare e installare 

make
make check
make install

Compilazione di Delft3D

Innanzitutto verificare che le $LD_LIBRARY_PATH siano quelle giuste: 

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/zlib-1.2.11/lib
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/szip-2.1.1/lib64
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5-1.10.1/lib64
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.5.0_icc/lib64
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/netcdf_4.4.4_ifort/lib64


Poi bisogna settare le variabili per le librerie netcdf (VECCHIO MODO, NON FUNZIONA, VEDERE SEZIONE DOPO) 

export NETCDFROOT=/opt/netcdf_4.4.3_ifort
export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64
export NETCDFROOT=/opt/netcdf_4.4.0_icc
export PKG_CONFIG_PATH=/$NETCDFROOT/lib64/pkgconfig:$PKG_CONFIG_PATH
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NETCDFROOT/lib64

Quindi impostare i settaggi di configurazione con ./configure

CC=/opt/intel/bin/icc CXX=/opt/intel/bin/icpc FC=/opt/intel/bin/ifort F77=/opt/intel/bin/ifort MPICXX=/opt/mpich3.2/bin/mpicxx MPIF77=/opt/mpich3.2/bin/mpif90 MPIFC=/opt/mpich3.2/bin/mpif90 FCLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl -lmpifort' FLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl' LIBS=' -L/opt/mpich3.2/lib64 -L/opt/intel/lib/intel64 -lrt -lexpat -lstdc++ -limf -lsvml -lirng -lintlc -lmpich -lmpifort' PPFLAGS='-I/opt/zlib-1.2.8/include -I/opt/szip-2.1/include -I/opt/hdf5-1.8.15/include -I/opt/netcdf_4.4.0_icc/include -I/opt/netcdf_4.4.3_ifort/include' LDFLAGS='-L/opt/zlib-1.2.8/lib -L/opt/szip-2.1/lib64 -L/opt/hdf5-1.8.16/lib64 -L/opt/netcdf_4.4.0_icc/lib64 -L/opt/netcdf_4.4.3_ifort/lib64' ./configure --prefix=/opt/Delft3D/5740_ifort



Per far funzioanre netcdf bisogna fare questi settaggi 

export CC=/opt/intel/bin/icc
export CXX=/opt/intel/bin/icpc
export FC=/opt/intel/bin/ifort
export F77=/opt/intel/bin/ifort
export MPICXX=/opt/mpich3.2/bin/mpicxx
export MPIF77=/opt/mpich3.2/bin/mpif90
export MPIFC=/opt/mpich3.2/bin/mpif90
export FCLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl -lmpifort' 
export FLIBS='-L/opt/intel/lib/intel64 -L/opt/mpich3.2/lib64 -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl' 
export LIBS='-L/opt/mpich3.2/lib64 -L/opt/intel/lib/intel64 -lrt -lexpat -lstdc++ -limf -lsvml -lirng -lintlc -lmpich -lmpifort' 
export FLIBS='L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64 -lnetcdf -lnetcdf' 
export NETCDF_CFLAGS='-I/opt/netcdf_4.4.4_ifort/include -I/opt/zlib-1.2.11/include -I/opt/szip-2.1.1/include -I/opt/hdf5-1.10.1/include -I/opt/netcdf_4.5.0_icc/include' 
export NETCDF_LIBS='-L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64 -L/opt/netcdf_4.5.0_icc/lib64 -lnetcdf -lnetcdf' 
export NETCDF_FORTRAN_LIBS=' -L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64' 
export NETCDF_LIBS='-L/opt/netcdf_4.4.4_ifort/lib -lnetcdff -L/opt/zlib-1.2.11/lib -L/opt/szip-2.1.1/lib64 -L/opt/hdf5-1.10.1/lib64' 

./configure --prefix=/opt/delft3D-t-7959-ifort/



Infine compilare e installare 

make
make install
Estratto da "http://www3.dicca.unige.it/meteocean/mediawiki/index.php?title=Compilatore_ifort&oldid=633"